Class: Origin

Origin defines the source metadata, where applicable, for ODM ItemRefs or ItemGroupRefs. Origin as a child element replaces the Origin attribute in ODM v1.3 that exists for the ItemDef and ItemGroupDef elements.The Origin element is based on the def:Origin element in Define-XML v2.1 with the Trace-XML v1.0 extension.

URI: odm:Origin

erDiagram
Origin {
    OriginType type  
    OriginSource source  
}
DocumentRef {
    oid leafID  
}
PDFPageRef {
    text pageRefs  
    positiveInteger firstPage  
    positiveInteger lastPage  
    PDFPageType type  
    text title  
}
Coding {
    text code  
    uriorcurie system  
    text systemName  
    text systemVersion  
    text label  
    uriorcurie href  
    uriorcurie ref  
    text commentOID  
}
SourceItems {

}
SourceItem {
    nameType name  
}
Description {

}
TranslatedText {
    languageType language  
    text type  
    contentType content  
}

Origin ||--|o Description : "description"
Origin ||--|o SourceItems : "sourceItems"
Origin ||--}o Coding : "coding"
Origin ||--}o DocumentRef : "documentRef"
DocumentRef ||--}o PDFPageRef : "pDFPageRef"
SourceItems ||--}o SourceItem : "sourceItem"
SourceItems ||--}o Coding : "coding"
SourceItem ||--|o ItemDef : "itemOID"
SourceItem ||--|o ItemGroupDef : "itemGroupOID"
SourceItem ||--|o MetaDataVersion : "metaDataVersionOID"
SourceItem ||--|o Study : "studyOID"
SourceItem ||--|o Leaf : "leafID"
SourceItem ||--}o Resource : "resource"
SourceItem ||--}o Coding : "coding"
Description ||--}o TranslatedText : "translatedText"

Slots

Name Cardinality* and Range Description Inheritance
type 1..1
OriginType		 Identifies how the clinical data values were obtained. direct
source 0..1
OriginSource		 Indicates the party responsible for the data's origin type. direct
description 0..1
Description		 Description reference: A free-text description of the containing metadata com... direct
sourceItems 0..1
SourceItems		 SourceItems reference: Identifies source items as needed to support automated... direct
coding 0..*
Coding		 Coding reference: Coding references a symbol from a defined code system. It u... direct
documentRef 0..*
DocumentRef		 The DocumentRef element is a container for page references in a PDF file. direct

* See LinkML documentation for cardinality definitions.

Usages

used by used in type used
ItemGroupDef origin range Origin
ItemRef origin range Origin

See Also

Identifier and Mapping Information

Schema Source

  • from schema: http://www.cdisc.org/ns/odm/v2.0

Mappings

Mapping Type Mapped Value
self odm:Origin
native odm:Origin

LinkML Source

Direct

name: Origin
description: Origin defines the source metadata, where applicable, for ODM ItemRefs
  or ItemGroupRefs. Origin as a child element replaces the Origin attribute in ODM
  v1.3 that exists for the ItemDef and ItemGroupDef elements.The Origin element is
  based on the def:Origin element in Define-XML v2.1 with the Trace-XML v1.0 extension.
from_schema: http://www.cdisc.org/ns/odm/v2.0
see_also:
- https://wiki.cdisc.org/display/PUB/Origin
rank: 1000
slots:
- type
- source
- description
- sourceItems
- coding
- documentRef
slot_usage:
  type:
    name: type
    description: Identifies how the clinical data values were obtained.
    comments:
    - 'Required

      range: text

      The list of allowable Origin/@Type attribute values is provided as non-extensible
      codelists in the CDISC Controlled Terminology, Define-XML package. * Users are
      encouraged to refer to the most recent version of the CDISC Controlled Terminology
      ( https://www.cdisc.org/standards/terminology/controlled-terminology ).'
    domain_of:
    - TranslatedText
    - PDFPageRef
    - Standard
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - Resource
    - MethodDef
    - StudyEndPoint
    - TransitionTimingConstraint
    - RelativeTimingConstraint
    - Branching
    - Organization
    - Query
    range: OriginType
    required: true
  source:
    name: source
    description: Indicates the party responsible for the data's origin type.
    comments:
    - 'Optional

      range: text

      The list of allowable Origin/@Source attribute values is provided in the CDISC
      Controlled Terminology, Define-XML package. * Users are encouraged to refer
      to the most recent version of the CDISC Controlled Terminology ( https://www.cdisc.org/standards/terminology/controlled-terminology
      ).'
    domain_of:
    - Origin
    - Query
    range: OriginSource
  description:
    name: description
    domain_of:
    - Study
    - MetaDataVersion
    - ValueListDef
    - StudyEventGroupRef
    - StudyEventGroupDef
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - ItemDef
    - CodeList
    - CodeListItem
    - MethodDef
    - ConditionDef
    - CommentDef
    - Protocol
    - StudyStructure
    - TrialPhase
    - StudyIndication
    - StudyIntervention
    - StudyObjective
    - StudyEndPoint
    - StudyTargetPopulation
    - StudyEstimand
    - IntercurrentEvent
    - SummaryMeasure
    - Arm
    - Epoch
    - TransitionTimingConstraint
    - AbsoluteTimingConstraint
    - RelativeTimingConstraint
    - DurationTimingConstraint
    - WorkflowDef
    - Criterion
    - Organization
    - Location
    - ODMFileMetadata
    range: Description
    maximum_cardinality: 1
  sourceItems:
    name: sourceItems
    domain_of:
    - Origin
    range: SourceItems
    maximum_cardinality: 1
  coding:
    name: coding
    multivalued: true
    domain_of:
    - StudyEventGroupDef
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - SourceItems
    - SourceItem
    - ItemDef
    - CodeList
    - CodeListItem
    - StudyIndication
    - StudyIntervention
    - StudyTargetPopulation
    - StudyParameter
    - ParameterValue
    - Criterion
    - Annotation
    range: Coding
    inlined: true
    inlined_as_list: true
  documentRef:
    name: documentRef
    multivalued: true
    domain_of:
    - AnnotatedCRF
    - SupplementalDoc
    - Origin
    - MethodDef
    - CommentDef
    range: DocumentRef
    inlined: true
    inlined_as_list: true
class_uri: odm:Origin

Induced

name: Origin
description: Origin defines the source metadata, where applicable, for ODM ItemRefs
  or ItemGroupRefs. Origin as a child element replaces the Origin attribute in ODM
  v1.3 that exists for the ItemDef and ItemGroupDef elements.The Origin element is
  based on the def:Origin element in Define-XML v2.1 with the Trace-XML v1.0 extension.
from_schema: http://www.cdisc.org/ns/odm/v2.0
see_also:
- https://wiki.cdisc.org/display/PUB/Origin
rank: 1000
slot_usage:
  type:
    name: type
    description: Identifies how the clinical data values were obtained.
    comments:
    - 'Required

      range: text

      The list of allowable Origin/@Type attribute values is provided as non-extensible
      codelists in the CDISC Controlled Terminology, Define-XML package. * Users are
      encouraged to refer to the most recent version of the CDISC Controlled Terminology
      ( https://www.cdisc.org/standards/terminology/controlled-terminology ).'
    domain_of:
    - TranslatedText
    - PDFPageRef
    - Standard
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - Resource
    - MethodDef
    - StudyEndPoint
    - TransitionTimingConstraint
    - RelativeTimingConstraint
    - Branching
    - Organization
    - Query
    range: OriginType
    required: true
  source:
    name: source
    description: Indicates the party responsible for the data's origin type.
    comments:
    - 'Optional

      range: text

      The list of allowable Origin/@Source attribute values is provided in the CDISC
      Controlled Terminology, Define-XML package. * Users are encouraged to refer
      to the most recent version of the CDISC Controlled Terminology ( https://www.cdisc.org/standards/terminology/controlled-terminology
      ).'
    domain_of:
    - Origin
    - Query
    range: OriginSource
  description:
    name: description
    domain_of:
    - Study
    - MetaDataVersion
    - ValueListDef
    - StudyEventGroupRef
    - StudyEventGroupDef
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - ItemDef
    - CodeList
    - CodeListItem
    - MethodDef
    - ConditionDef
    - CommentDef
    - Protocol
    - StudyStructure
    - TrialPhase
    - StudyIndication
    - StudyIntervention
    - StudyObjective
    - StudyEndPoint
    - StudyTargetPopulation
    - StudyEstimand
    - IntercurrentEvent
    - SummaryMeasure
    - Arm
    - Epoch
    - TransitionTimingConstraint
    - AbsoluteTimingConstraint
    - RelativeTimingConstraint
    - DurationTimingConstraint
    - WorkflowDef
    - Criterion
    - Organization
    - Location
    - ODMFileMetadata
    range: Description
    maximum_cardinality: 1
  sourceItems:
    name: sourceItems
    domain_of:
    - Origin
    range: SourceItems
    maximum_cardinality: 1
  coding:
    name: coding
    multivalued: true
    domain_of:
    - StudyEventGroupDef
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - SourceItems
    - SourceItem
    - ItemDef
    - CodeList
    - CodeListItem
    - StudyIndication
    - StudyIntervention
    - StudyTargetPopulation
    - StudyParameter
    - ParameterValue
    - Criterion
    - Annotation
    range: Coding
    inlined: true
    inlined_as_list: true
  documentRef:
    name: documentRef
    multivalued: true
    domain_of:
    - AnnotatedCRF
    - SupplementalDoc
    - Origin
    - MethodDef
    - CommentDef
    range: DocumentRef
    inlined: true
    inlined_as_list: true
attributes:
  type:
    name: type
    description: Identifies how the clinical data values were obtained.
    comments:
    - 'Required

      range: text

      The list of allowable Origin/@Type attribute values is provided as non-extensible
      codelists in the CDISC Controlled Terminology, Define-XML package. * Users are
      encouraged to refer to the most recent version of the CDISC Controlled Terminology
      ( https://www.cdisc.org/standards/terminology/controlled-terminology ).'
    from_schema: http://www.cdisc.org/ns/odm/v2.0
    rank: 1000
    alias: type
    owner: Origin
    domain_of:
    - TranslatedText
    - PDFPageRef
    - Standard
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - Resource
    - MethodDef
    - StudyEndPoint
    - TransitionTimingConstraint
    - RelativeTimingConstraint
    - Branching
    - Organization
    - Query
    range: OriginType
    required: true
  source:
    name: source
    description: Indicates the party responsible for the data's origin type.
    comments:
    - 'Optional

      range: text

      The list of allowable Origin/@Source attribute values is provided in the CDISC
      Controlled Terminology, Define-XML package. * Users are encouraged to refer
      to the most recent version of the CDISC Controlled Terminology ( https://www.cdisc.org/standards/terminology/controlled-terminology
      ).'
    from_schema: http://www.cdisc.org/ns/odm/v2.0
    rank: 1000
    alias: source
    owner: Origin
    domain_of:
    - Origin
    - Query
    range: OriginSource
  description:
    name: description
    description: 'Description reference: A free-text description of the containing
      metadata component, unless restricted by Business Rules.'
    from_schema: http://www.cdisc.org/ns/odm/v2.0
    rank: 1000
    alias: description
    owner: Origin
    domain_of:
    - Study
    - MetaDataVersion
    - ValueListDef
    - StudyEventGroupRef
    - StudyEventGroupDef
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - ItemDef
    - CodeList
    - CodeListItem
    - MethodDef
    - ConditionDef
    - CommentDef
    - Protocol
    - StudyStructure
    - TrialPhase
    - StudyIndication
    - StudyIntervention
    - StudyObjective
    - StudyEndPoint
    - StudyTargetPopulation
    - StudyEstimand
    - IntercurrentEvent
    - SummaryMeasure
    - Arm
    - Epoch
    - TransitionTimingConstraint
    - AbsoluteTimingConstraint
    - RelativeTimingConstraint
    - DurationTimingConstraint
    - WorkflowDef
    - Criterion
    - Organization
    - Location
    - ODMFileMetadata
    range: Description
    maximum_cardinality: 1
  sourceItems:
    name: sourceItems
    description: 'SourceItems reference: Identifies source items as needed to support
      automated data capture and end-to-end traceability.'
    from_schema: http://www.cdisc.org/ns/odm/v2.0
    rank: 1000
    alias: sourceItems
    owner: Origin
    domain_of:
    - Origin
    range: SourceItems
    maximum_cardinality: 1
  coding:
    name: coding
    description: 'Coding reference: Coding references a symbol from a defined code
      system. It uses a code defined in a terminology system to associate semantics
      with a given term, codelist, variable, or group of variables. The presence of
      a Coding element associates a meaning to its parent element. Including multiple
      Coding elements for a given parent indicates synonymous meanings provided by
      different code systems or code system versions.'
    from_schema: http://www.cdisc.org/ns/odm/v2.0
    rank: 1000
    multivalued: true
    alias: coding
    owner: Origin
    domain_of:
    - StudyEventGroupDef
    - StudyEventDef
    - ItemGroupDef
    - Origin
    - SourceItems
    - SourceItem
    - ItemDef
    - CodeList
    - CodeListItem
    - StudyIndication
    - StudyIntervention
    - StudyTargetPopulation
    - StudyParameter
    - ParameterValue
    - Criterion
    - Annotation
    range: Coding
    inlined: true
    inlined_as_list: true
  documentRef:
    name: documentRef
    description: The DocumentRef element is a container for page references in a PDF
      file.
    from_schema: http://www.cdisc.org/ns/odm/v2.0
    rank: 1000
    multivalued: true
    alias: documentRef
    owner: Origin
    domain_of:
    - AnnotatedCRF
    - SupplementalDoc
    - Origin
    - MethodDef
    - CommentDef
    range: DocumentRef
    inlined: true
    inlined_as_list: true
class_uri: odm:Origin